Received license from accelrys -- it is in 
/srv/local/quanta/shell.core_81328.1.873
(This will be installed as /srv/local/quanta/Licese_Pack/licenses/msilicense.dat
during the installation process)

license_pack.tar -- V6.2.4 downloaded 2004.02.16 from
  http://www.accelrys.com/support/life/patches/licensepack.html

Installing license pack on shell (into /srv/local/quanta/License_Pack)
> cd /srv/local/quanta
> tar xf license_pack.tar
> rm license_pack.tar
> ./lpsetup
> cd License_Pack
> rm -r ibm*
> rm -r Linux_2_Intel_32* 
> rm -r OSF1_4_Alpha_64

MSI user account: Docs say an MSI account is required "to hold and install
products, not for day-to-day use." later, the docus say "The msi user must
exist on all machines from which you plan to run the program." I will 
reactivate the MSI user, with password, and home of /srv/local/quanta.

Changed ownership of /srv/local/quanta and its descendents to 800.800.

Install Quanta using manual installation:

1. Copy the stuff off the distribution media 
* Log in to oso2 (or any host with a CD) as user msi. 
* mount the quanta CD
> cd /CDROM; ./INSTALL.EXE 
--> install into /srv/local/quanta/*
--> license directory is */License_Pack
Files successfully installed to disk.

2. CONFIGURE SITE-SPECIFIC FILES
+ files to be configured are listed in 
  /srv/local/quanta/quanta2000/install/product.config:

Replace %MSIInstallRoot% with /srv/local/quanta/quanta2000
.setquanta: 
library/applcomm.db
library/default.xplor 
exec/charmm 
exec/charmm.emu 
exec/mcss
modeler/.setmodeler 
modeler/modeler.bat 
modeler/exec/runmod  -> MSI_LIC_INFO_DIR=/srv/local/quanta/quanta2000/CHECKSUM
install/lic_setup: setenv MSI_LIC_INFO_DIR /srv/local/quanta/quanta2000/CHECKSUM
      setenv LM_LICENSE_FILE /srv/local/quanta/quanta2000/license/msilicense.dat
install/lic_setup.sh 
install/msiroot_config
install/msi_lic.sh      MSI_LIC_PACK_DIR=/srv/local/quanta/License_Pack

3. /etc/hosts.equiv on shell.  Already contains localhost. 

4. Install license: 
> source ~msi/License_Pack/msi_lic_cshrc 
> cd /srv/local/quanta/quanta2000/install
> get_license
        1. Install emailed or current license file.
Please enter a full path to the license file (q to quit):
/srv/local/quanta/shell.core_81328.1.873
INFO - *** INSTALLED NEW LICENSE FILE *** ; COPIED FILE
 FROM: /srv/local/quanta/License_Pack/licenses/backup/shell.core_81328.1.873_filtered.1
 TO:   /srv/local/quanta/License_Pack/licenses/msilicense.dat
INFO - Modified DAEMON msi <path> to be
       /srv/local/quanta/License_Pack/irix6m4/exe/msid

5. Install and enable the license manager:
> source ~msi/License_Pack/msi_lic_cshrc 
> lmup -b
Checking /srv/local/quanta/License_Pack/licenses/msilicense.dat
Starting Accelrys License Daemon
Log file being placed in /srv/local/quanta/License_Pack/logs/msilicense_1715.log
16:01:15 (msi) FLEXlm version 8.4a
16:01:15 (msi) Server started on shell.core for:        License_Holder
16:01:15 (msi) nquanta          quanta          xautofit
16:01:15 (msi) xbuild           xligand         xpowerfit
=======  Automating Startup of License Daemons at Bootup Time  =======
In particular, the following will take place:
  > ln -s /srv/local/quanta/License_Pack/irix6m4/exe/lmgrd /etc/lmgrd
  > ln -s /srv/local/quanta/License_Pack/logs/msilicense_1715.log /etc/msilicense_1715.log
  > ln -s /srv/local/quanta/License_Pack/licenses/msilicense.dat /etc/msilicense.dat
Then the /etc/init.d/msi_lmboot file will be configured to use current user,
and linked to appropriate start up and shut down directories in the /etc:
  > ln -s /etc/init.d/msi_lmboot /etc/rc2.d/S99msi_lmboot
  > ln -s /etc/init.d/msi_lmboot /etc/rc0.d/K10msi_lmboot

Script died for unknown causes before finishing. Manually modified
	/srv/local/quanta/License_Pack/bin/msi_lmboot and as root:
copied to /etc/init.d/msi_lmboot
# ln -s /etc/init.d/msi_lmboot /etc/rc2.d/S99msi_lmboot
# ln -s /etc/init.d/msi_lmboot /etc/rc0.d/K10msi_lmboot

Got it to work, and copied (backed up) the necessary file:
> cp /etc/init.d/msi_lmboot /srv/local/quanta/License_Pack/bin/msi_lmboot.CSB

Verified as perlo:
  source ~msi/License_Pack/msi_lic_cshrc 
  license_verifier
       NOW ANALYZING THE FOLLOWING LICENSE FILE:
/srv/local/quanta/License_Pack/licenses/msilicense.dat
   OK: FEATURE License_Holder    msi (2005.020)(999 Floating license(s))
   OK: FEATURE nquanta           msi (2005.020)(1 Floating license(s))
   OK: FEATURE quanta            msi (2005.020)(1 Floating license(s))
   OK: FEATURE xautofit          msi (2005.020)(1 Floating license(s))
   OK: FEATURE xbuild            msi (2005.020)(1 Floating license(s))
   OK: FEATURE xligand           msi (2005.020)(1 Floating license(s))
   OK: FEATURE xpowerfit         msi (2005.020)(1 Floating license(s))
   OK: FEATURE License_Pack      msi (6.240)(Node-Locked License)

6. Verify installation:
  source ~msi/quanta2000/.setquanta
  quanta

Claims that lic_ldpath is an undefined variable
works if you first source ~msi/License_Pack/msi_lic_cshrc

7. Create and document setup and runtime procedures
Created /srv/local/quanta/quanta.set.
ln -s /srv/local/quanta/quanta.set /srv/local/setup/quanta.set

created /eve/www/csb_home/userguides/graphics/quanta
copied the tutorial directory there
copied the quanta2k documentation directory from the InsightII CD
Installed an .htaccess file in the documentation directory on the web page,
so only CSB computers can access Accelrys' documentation.