Contact analysis (ANACON)

• Introduction.
• Graphical contact analysis
  • Evaluating the hand of structures (CONHAN)
  • Analyzing residue contacts (CONRES)
  • Analyzing atomic contacts (CONATM)
  • Analyzing residue contacts (RSCACA)
  • Analyzing residue contacts (RSCBCB)
• Counting contacts
  • Counting residue contacts (CNTRES)
  • Counting atomic contacts (CNTATM)
• Other contact related options
  • Listing contact analysis (CONTAC)
  • Listing contact analysis (CONDBL)
  • Listing contacts (CONTYP)
  • Listing contacts (CONTPS)
  • Bump analysis (BUMPS)
  • Listing all contacts of one atom (LSTATC)
  • Tabulating bumps (BMPTAB)
  • Showing salt bridges (SHOSBR)
• Parameter options
  • Changing parameters (PARAMS)
    • (BOXTYP)
    • (FRMCOL)
    • (SEQCOL)
    • (NEICOL)
    • (CACFLG)
    • (1O3FLG)
    • (HOFFLG)
    • (CACCOL)
    • (CONLIN)
  • Showing parameters (SHOPAR)